Tag Archives: Befi-BaTS

BaTS (and Befi-BaTS), SHiAT, and Genome Convergence Pipeline have moved!

Important – please take note! Headline: All my phylogenetics software is now on GitHub, not websites or Google Code Please use the new FAQ pages and issue/bug tracker forms, rather than emailing me directly in the first instance Until now, … Continue reading

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Befi-BaTS v0.1.1 alpha release

Long-overdue update for beta version of Befi-BaTS. Software: Befi-BaTS Author: Joe Parker Version: 0.1.1 beta (download here) Release notes: Befi-BaTS v0.1 beta drops support for hard polytomies (tree nodes with > 2 daughters), now throwing a HardPolytomyException to the error … Continue reading

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The within- and among-host evolution of chronically-infecting human RNA viruses

A research thesis submitted for the degree of Doctor of Philosophy at the University of Oxford. J Parker Funded by: Natural Environment Research Council (UK) with support from Linacre College, Oxford. Abstract: This thesis examines the evolutionary biology of the … Continue reading

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