In prep. (v0 – 24 February 2015)
Summary. Genome Convergence Pipeline consists of a Java API and an executable binary jarfile with graphical user interface (GUI) for the high-throughput analysis of phylogenomic datasets to detect convergent molecular evolution.
Motivation. Although convergent phenotypes are readily observed in nature evidence that evolution can produce convergent signals in genetic sequences have only recently emerged. The Genome Convergence Pipeline facilitates these analyses.
Results. The application has been successfully implemented on a variety of infrastructures.
Manuscripts in progress (all rights reserved – you may not copy or distribute these files; content and conclusions subject to change; strictly embargoed until publication in a peer-reviewed journal/book):